Transcript: lnc-MOCS2-2:1

Basic information

LNCipedia transcript ID: lnc-MOCS2-2:1 
LNCipedia gene ID: lnc-MOCS2-2
Ensembl Gene ID: ENSG00000248898
Ensembl Transcript ID: ENST00000502995
Location (hg38): chr5:52675193-52788026
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 593 bp
Exons: 4
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000502995.1; CTD-2288O8.1-001; OTTHUMT00000367706.1; NONHSAT101409
Alternative gene names: ENSG00000248898.1; CTD-2288O8.1; OTTHUMG00000162165.1; AC022126.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -6.3515 non-coding 
CPAT coding probability 2.46% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-MOCS2-2:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-MOCS2-2:1
4.0 lnc-MOCS2-2:1
4.1 lnc-MOCS2-2:1
5.0 lnc-MOCS2-2:1
5.1 lnc-ACTBL2-55:1
5.2 lnc-MOCS2-2:1