Transcript: lnc-MON2-2:5

Basic information

LNCipedia transcript ID: lnc-MON2-2:5 
LNCipedia gene ID: lnc-MON2-2
Ensembl Gene ID: ENSG00000257354
Ensembl Transcript ID: ENST00000550290
Location (hg38): chr12:62602752-62622213
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 8693 bp
Exons: 2
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000550290.2
Alternative gene names: ENSG00000257354.2; RP11-631N16.2; AC048341.2; AC048341.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -14.9443 non-coding 
CPAT coding probability 0.85% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-MON2-2:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-MON2-2:5
4.1 lnc-MON2-2:5
5.0 lnc-MON2-2:5
5.1 lnc-RXYLT1-13:5
5.2 lnc-MON2-2:5