Transcript: lnc-MON2-3:1

Basic information

LNCipedia transcript ID: lnc-MON2-3:1 
LNCipedia gene ID: lnc-MON2-3
Location (hg38): chr12:63151065-63154006
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 333 bp
Exons: 3
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4
Alternative transcript names: ENST00000547051.1; RP11-715H19.2-001; OTTHUMT00000406735.1; NONHSAT029107
Alternative gene names: ENSG00000257973.1; RP11-715H19.2; OTTHUMG00000169981.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -341.3568 non-coding 
CPAT coding probability 1.13% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-MON2-3:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-MON2-3:1
4.0 lnc-MON2-3:1
4.1 lnc-MON2-3:1
5.0 lnc-MON2-3:1
5.1 lnc-RXYLT1-7:1
5.2 lnc-MON2-3:1