Transcript: lnc-MPHOSPH6-3:1

Basic information

LNCipedia transcript ID: lnc-MPHOSPH6-3:1 
LNCipedia gene ID: lnc-MPHOSPH6-3
Ensembl Gene ID: ENSG00000260832
Ensembl Transcript ID: ENST00000565238
RefSeq ID: NR_110937
Location (hg38): chr16:82953230-82990298
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1493 bp
Exons: 3
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Refseq - Dec 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018; Refseq - NCBI Annotation Release 106
Alternative transcript names: ENST00000565238.1; CTD-3253I12.1-001; OTTHUMT00000432935.1; NONHSAT143997; NR_110937; NR_110937.1
Alternative gene names: ENSG00000260832.1; CTD-3253I12.1; OTTHUMG00000176638.1; AC125793.1; LOC101928417


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -153.9599 non-coding 
CPAT coding probability 1.48% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-MPHOSPH6-3:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-MPHOSPH6-3:1
4.0 lnc-MPHOSPH6-3:1
4.1 lnc-MPHOSPH6-3:1
5.0 lnc-MPHOSPH6-3:1
5.1 lnc-MAF-39:1
5.2 lnc-MPHOSPH6-3:1