Transcript: lnc-MPHOSPH6-8:1

Basic information

LNCipedia transcript ID: lnc-MPHOSPH6-8:1 
LNCipedia gene ID: lnc-MPHOSPH6-8
Ensembl Gene ID: ENSG00000261285
Ensembl Transcript ID: ENST00000563825
Location (hg38): chr16:82510108-82510919
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 557 bp
Exons: 3
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000563825.1; RP11-481E4.2-001; OTTHUMT00000432578.1; NONHSAT143989
Alternative gene names: ENSG00000261285.1; RP11-481E4.2; OTTHUMG00000176579.1; ENSG00000261285.5; AC009117.3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -3.9647 non-coding 
CPAT coding probability 0.89% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-MPHOSPH6-8:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-MPHOSPH6-1:1
4.0 lnc-MPHOSPH6-8:1
4.1 lnc-MPHOSPH6-8:1
5.0 lnc-MPHOSPH6-8:1
5.1 lnc-MAF-37:1
5.2 lnc-MPHOSPH6-8:1