Transcript: lnc-MPLKIP-7:2

Basic information

LNCipedia transcript ID: lnc-MPLKIP-7:2 
LNCipedia gene ID: lnc-MPLKIP-7
Location (hg38): chr7:39545650-39566239
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 410 bp
Exons: 3
Sources: Broad Institute; Gencode v13; Ensembl release 68 - Jul 2012
Alternative transcript names: TCONS_00013157; ENST00000439751.1; AC011290.4-001; OTTHUMT00000339281.1
Alternative gene names: XLOC_006414; linc-VPS41-5; ENSG00000227172.1; AC011290.4; OTTHUMG00000155274.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -92.7782 non-coding 
CPAT coding probability 0.93% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-MPLKIP-7:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-C7orf11-3:2
3.1 lnc-C7orf11-7:2
4.0 lnc-C7orf11-7:2
4.1 lnc-C7orf11-7:2
5.0 lnc-C7orf11-7:2
5.1 lnc-SFRP4-23:2
5.2 lnc-MPLKIP-7:2