Transcript: lnc-MPPE1-10:1

Basic information

LNCipedia transcript ID: lnc-MPPE1-10:1 
LNCipedia gene ID: lnc-MPPE1-10
Ensembl Gene ID: ENSG00000267480
Ensembl Transcript ID: ENST00000587619
Location (hg38): chr18:12031178-12032181
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 527 bp
Exons: 2
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT058336; ENST00000587619.1
Alternative gene names: ENSG00000267480.1; RP11-703I16.1; AP001542.3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -196.0777 non-coding 
CPAT coding probability 4.59% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-MPPE1-10:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AP002414.1.1-1:2
4.0 lnc-AP002414.1.1-1:2
4.1 lnc-AP002414.1.1-1:2
5.0 lnc-AP002414.1.1-1:2
5.1 lnc-SMAD2-269:1
5.2 lnc-MPPE1-10:1