Transcript: lnc-MPPE1-10:2

Basic information

LNCipedia transcript ID: lnc-MPPE1-10:2 
LNCipedia gene ID: lnc-MPPE1-10
Location (hg38): chr18:12031122-12032133
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 262 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00026678; NONHSAT058335
Alternative gene names: XLOC_012773; linc-MPPE1-4


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -94.8094 non-coding 
CPAT coding probability 4.66% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-MPPE1-10:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-AP002414.1.1-1:1
3.1 lnc-AP002414.1.1-1:1
4.0 lnc-AP002414.1.1-1:1
4.1 lnc-AP002414.1.1-1:1
5.0 lnc-AP002414.1.1-1:1
5.1 lnc-SMAD2-269:2
5.2 lnc-MPPE1-10:2