Transcript: lnc-MPPE1-12:1

Basic information

LNCipedia transcript ID: lnc-MPPE1-12:1 
LNCipedia gene ID: lnc-MPPE1-12
Location (hg38): chr18:11666456-11670187
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 3710 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT058101
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -26.7461 non-coding 
CPAT coding probability 20.30% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-MPPE1-12:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RP11-677O4.1.1-1:2
4.0 lnc-RP11-677O4.1.1-1:2
4.1 lnc-RP11-677O4.1.1-1:2
5.0 lnc-RP11-677O4.1.1-1:2
5.1 lnc-SMAD2-278:1
5.2 lnc-MPPE1-12:1