Transcript: lnc-MPV17L2-1:5

Basic information

LNCipedia transcript ID: lnc-MPV17L2-1:5 
LNCipedia gene ID: lnc-MPV17L2-1
Ensembl Gene ID: ENSG00000268650
Ensembl Transcript ID: ENST00000599416
Location (hg38): chr19:18204734-18209046
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 415 bp
Exons: 3
Sources: Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000599416.2
Alternative gene names: ENSG00000268650.3; AC068499.10; AC005759.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -86.6744 non-coding 
CPAT coding probability 2.27% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-MPV17L2-1:5 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-MPV17L2-1:5
4.0 lnc-MPV17L2-1:5
4.1 lnc-MPV17L2-1:5
5.0 lnc-MPV17L2-1:5
5.1 lnc-MPV17L2-1:5
5.2 lnc-MPV17L2-1:5