Transcript: lnc-MRC2-3:1

Basic information

LNCipedia transcript ID: lnc-MRC2-3:1 
LNCipedia gene ID: lnc-MRC2-3
Ensembl Gene ID: ENSG00000265000
Ensembl Transcript ID: ENST00000584542
Location (hg38): chr17:62808500-62836371
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1811 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000584542.1; RP11-453A12.1-001; OTTHUMT00000445258.1; NONHSAT055178
Alternative gene names: ENSG00000265000.1; RP11-453A12.1; OTTHUMG00000179193.1; AC068512.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 9.5906 non-coding 
CPAT coding probability 6.81% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-MRC2-3:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-MRC2-3:1
4.0 lnc-MRC2-3:1
4.1 lnc-MRC2-3:1
5.0 lnc-MRC2-3:1
5.1 lnc-TANC2-10:2
5.2 lnc-MRC2-3:1