Transcript: lnc-MRM1-2:3

Basic information

LNCipedia transcript ID: lnc-MRM1-2:3 
LNCipedia gene ID: lnc-MRM1-2
Ensembl Gene ID: ENSG00000275613
Ensembl Transcript ID: ENST00000610398
Location (hg38): chr17:36722583-36726340
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 455 bp
Exons: 3
Sources: Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000591939.1; ENST00000610398.1
Alternative gene names: ENSG00000267785.1; CTD-3194G12.2; ENSG00000275613.1; AC243830.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -587.1369 non-coding 
CPAT coding probability 2.56% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-MRM1-2:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-MRM1-2:3
4.0 lnc-MRM1-2:3
4.1 lnc-MRM1-2:3
5.0 lnc-MRM1-2:3
5.1 lnc-RPL19-53:3
5.2 lnc-MRM1-2:3