Transcript: lnc-MRPL11-1:4

Basic information

LNCipedia transcript ID: lnc-MRPL11-1:4 
LNCipedia gene ID: lnc-MRPL11-1
Ensembl Gene ID: ENSG00000255517
Ensembl Transcript ID: ENST00000533502
Location (hg38): chr11:66474359-66480192
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 581 bp
Exons: 3
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000533502.1; CTD-3074O7.5-002; OTTHUMT00000393084.1; NONHSAT022306
Alternative gene names: ENSG00000255517.1; CTD-3074O7.5; OTTHUMG00000167095.1; ENSG00000255517.2; ENSG00000255517.6; AP002748.3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -83.2029 non-coding 
CPAT coding probability 2.79% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-MRPL11-1:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-MRPL11-1:4
4.0 lnc-MRPL11-1:4
4.1 lnc-MRPL11-1:4
5.0 lnc-MRPL11-1:4
5.1 lnc-POLD4-24:17
5.2 lnc-MRPL11-1:4