Transcript: lnc-MRPL19-1:1

Basic information

LNCipedia transcript ID: lnc-MRPL19-1:1 
LNCipedia gene ID: lnc-MRPL19-1
Location (hg38): chr2:75540739-75542706
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1101 bp
Exons: 2
Sources: Biogazelle lncRNA chip; Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4
Alternative transcript names: ENST00000451622; ENST00000451622.1; AC007099.1-001; OTTHUMT00000328729.1; NONHSAT071801
Alternative gene names: ENSG00000231172; AC007099.1; ENSG00000231172.1; OTTHUMG00000152941.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 4.8084 non-coding 
CPAT coding probability 1.70% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-MRPL19-1:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-MRPL19-1:1
3.1 lnc-MRPL19-1:1
4.0 lnc-MRPL19-1:1
4.1 lnc-MRPL19-1:1
5.0 lnc-MRPL19-1:1
5.1 lnc-POLE4-27:2
5.2 lnc-MRPL19-1:1