Transcript: lnc-MRPL3-2:11

Basic information

LNCipedia transcript ID: lnc-MRPL3-2:11 
LNCipedia gene ID: lnc-MRPL3-2
Location (hg38): chr3:131337654-131361617
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 23964 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000250608.1|ENCT00000308992.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 33.8446 non-coding 
CPAT coding probability 7.49% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-MRPL3-2:11 no no no no

Available literature

  1. Tørring (2014), Long non-coding RNA expression profiles in hereditary haemorrhagic telangiectasia., PLoS ONE


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-MRPL3-2:11
5.0 lnc-MRPL3-2:11
5.1 lnc-H1FX-26:8
5.2 lnc-MRPL3-2:11