Transcript: lnc-MRPL37-1:4

Basic information

LNCipedia transcript ID: lnc-MRPL37-1:4 
LNCipedia gene ID: lnc-MRPL37-1
Ensembl Gene ID: ENSG00000225632
Ensembl Transcript ID: ENST00000426901
Location (hg38): chr1:54285405-54287371
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1111 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000426901.1; RP5-997D24.3-001; OTTHUMT00000022719.1
Alternative gene names: ENSG00000225632.1; RP5-997D24.3; OTTHUMG00000008263.1; AL161644.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -175.5375 non-coding 
CPAT coding probability 19.66% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-MRPL37-1:4 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C1orf191-1:1
4.0 lnc-C1orf191-1:1
4.1 lnc-C1orf191-1:1
5.0 lnc-C1orf191-1:1
5.1 lnc-MRPL37-1:1
5.2 lnc-MRPL37-1:4