Transcript: lnc-MRPL39-13:2

Basic information

LNCipedia transcript ID: lnc-MRPL39-13:2 
LNCipedia gene ID: lnc-MRPL39-13
Location (hg38): chr21:23361775-23364207
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 635 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00029093; NONHSAT081424
Alternative gene names: XLOC_014026; linc-TMPRSS15-23


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -174.7884 non-coding 
CPAT coding probability 0.42% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-MRPL39-13:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-MRPL39-12:2
3.1 lnc-MRPL39-13:2
4.0 lnc-MRPL39-13:2
4.1 lnc-MRPL39-13:2
5.0 lnc-MRPL39-13:2
5.1 lnc-N6AMT1-45:5
5.2 lnc-MRPL39-13:2