Transcript: lnc-MRPL39-13:5

Basic information

LNCipedia transcript ID: lnc-MRPL39-13:5 
LNCipedia gene ID: lnc-MRPL39-13
Location (hg38): chr21:23361104-23384866
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1730 bp
Exons: 5
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000228592.1|ENST00000262354.4
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -23.6704 non-coding 
CPAT coding probability 0.10% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-MRPL39-13:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-MRPL39-13:5
5.0 lnc-MRPL39-13:5
5.1 lnc-N6AMT1-45:2
5.2 lnc-MRPL39-13:5