Transcript: lnc-MRPL39-2:3

Basic information

LNCipedia transcript ID: lnc-MRPL39-2:3 
LNCipedia gene ID: lnc-MRPL39-2
Location (hg38): chr21:25568030-25569116
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1087 bp
Exons: 1
Sources: NONCODE v4
Alternative transcript names: NONHSAT081502
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -158.9886 non-coding 
CPAT coding probability 21.51% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-MRPL39-2:3 no no no no

Available literature

  1. Iosue (2013), Argonaute 2 sustains the gene expression program driving human monocytic differentiation of acute myeloid leukemia cells., Cell Death Dis


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-MRPL39-2:3
4.0 lnc-MRPL39-2:3
4.1 lnc-MRPL39-2:3
5.0 lnc-MRPL39-2:3
5.1 lnc-N6AMT1-23:2
5.2 lnc-MRPL39-2:3