Transcript: lnc-MRPS23-1:4

Basic information

LNCipedia transcript ID: lnc-MRPS23-1:4 
LNCipedia gene ID: lnc-MRPS23-1
Location (hg38): chr17:57770999-57851800
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 8681 bp
Exons: 8
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000265542.1|MICT00000151158.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 1197.6287 coding 
CPAT coding probability 88.18% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-MRPS23-1:4 yes no no no

Available literature

  1. Di Salvo (2015), Right ventricular long noncoding RNA expression in human heart failure., Pulm Circ


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-MRPS23-1:4
5.0 lnc-MRPS23-1:4
5.1 lnc-PTRH2-38:1
5.2 lnc-MRPS23-1:4