Transcript: lnc-MSR1-2:7

Basic information

LNCipedia transcript ID: lnc-MSR1-2:7 
LNCipedia gene ID: lnc-MSR1-2
Location (hg38): chr8:16367644-16373288
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 819 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00014938; NONHSAT125243
Alternative gene names: XLOC_007012; linc-MSR1-1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -180.5832 non-coding 
CPAT coding probability 0.42% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-MSR1-2:7 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-FGF20-2:1
3.1 lnc-FGF20-2:1
4.0 lnc-MSR1-2:7
4.1 lnc-MSR1-2:7
5.0 lnc-MSR1-2:7
5.1 lnc-PINX1-82:6
5.2 lnc-MSR1-2:7