Transcript: lnc-MST1-1:12

Basic information

LNCipedia transcript ID: lnc-MST1-1:12 
LNCipedia gene ID: lnc-MST1-1
Location (hg38): chr3:49684325-49685298
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 878 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT089720
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 38.7197 non-coding 
CPAT coding probability 49.35% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-MST1-1:12 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AMIGO3-1:12
4.0 lnc-MST1-1:12
4.1 lnc-MST1-1:12
5.0 lnc-MST1-1:12
5.1 lnc-CAMKV-13:11
5.2 lnc-MST1-1:12