Transcript: lnc-MST1-1:8

Basic information

LNCipedia transcript ID: lnc-MST1-1:8 
LNCipedia gene ID: lnc-MST1-1
Location (hg38): chr3:49685482-49686857
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 859 bp
Exons: 5
Sources: NONCODE v4
Alternative transcript names: NONHSAT089725
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -312.8945 non-coding 
CPAT coding probability 89.54% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-MST1-1:8 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AMIGO3-1:8
4.0 lnc-MST1-1:8
4.1 lnc-MST1-1:8
5.0 lnc-MST1-1:8
5.1 lnc-CAMKV-13:7
5.2 lnc-MST1-1:8