Transcript: lnc-MTHFSD-62:2

Basic information

LNCipedia transcript ID: lnc-MTHFSD-62:2 
LNCipedia gene ID: lnc-MTHFSD-62
Location (hg38): chr16:86191047-86200586
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 365 bp
Exons: 3
Sources: Broad Institute
Alternative transcript names: TCONS_00025079
Alternative gene names: XLOC_012043; linc-COX4NB-4


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -31.137 non-coding 
CPAT coding probability 2.48% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-MTHFSD-62:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-AC092327.1-3:2
3.1 lnc-AC092327.1-3:2
4.0 lnc-AC092327.1-3:2
4.1 lnc-AC092327.1-3:2
5.0 lnc-AC092327.1-3:2
5.1 lnc-MTHFSD-9:2
5.2 lnc-MTHFSD-62:2