Transcript: lnc-MTMR6-1:1

Basic information

LNCipedia transcript ID: lnc-MTMR6-1:1 
LNCipedia gene ID: lnc-MTMR6-1
Ensembl Gene ID: ENSG00000260509
Ensembl Transcript ID: ENST00000568856
Location (hg38): chr13:25300124-25301438
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 1315 bp
Exons: 1
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT032591; ENST00000568856.2
Alternative gene names: ENSG00000260509.2; RP11-271M24.2; AL590787.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -53.2222 non-coding 
CPAT coding probability 20.03% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-MTMR6-1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-MTMR6-1:1
4.0 lnc-MTMR6-1:1
4.1 lnc-MTMR6-1:1
5.0 lnc-MTMR6-1:1
5.1 lnc-ZDHHC20-86:2
5.2 lnc-MTMR6-1:1