Transcript: lnc-MTMR9-3:2

Basic information

LNCipedia transcript ID: lnc-MTMR9-3:2 
LNCipedia gene ID: lnc-MTMR9-3
Ensembl Gene ID: ENSG00000270076
Ensembl Transcript ID: ENST00000602443
Location (hg38): chr8:11202965-11203671
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 707 bp
Exons: 1
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT125042; ENST00000602443.1
Alternative gene names: ENSG00000270076.1; AF131215.8; AF131215.7


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -154.0925 non-coding 
CPAT coding probability 0.18% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-MTMR9-3:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-MTMR9-3:2
4.0 lnc-MTMR9-3:2
4.1 lnc-MTMR9-3:2
5.0 lnc-MTMR9-3:2
5.1 lnc-DEFB106A-62:2
5.2 lnc-MTMR9-3:2