Transcript: lnc-MTRNR2L1-83:3

Basic information

LNCipedia transcript ID: lnc-MTRNR2L1-83:3 
LNCipedia gene ID: lnc-MTRNR2L1-83
Location (hg38): chr17:22405392-22413741
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 3795 bp
Exons: 2
Sources: NONCODE v4; Ensembl release 75 - Feb 2014
Alternative transcript names: NONHSAT052242; ENST00000581223.2
Alternative gene names: ENSG00000266795.2; RP11-744K17.9


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 112.8438 coding 
CPAT coding probability 69.55% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-MTRNR2L1-83:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-FAM27L-6:4
4.0 lnc-FAM27L-6:4
4.1 lnc-FAM27L-6:4
5.0 lnc-FAM27L-6:4
5.1 lnc-PIPOX-83:3
5.2 lnc-MTRNR2L1-83:3