Transcript: lnc-MTRNR2L5-4:1

Basic information

LNCipedia transcript ID: lnc-MTRNR2L5-4:1 
LNCipedia gene ID: lnc-MTRNR2L5-4
Ensembl Gene ID: ENSG00000234173
Ensembl Transcript ID: ENST00000422842
RefSeq ID: NR_134503
Location (hg38): chr10:54486230-54656051
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2300 bp
Exons: 6
Sources: Gencode v13; Ensembl release 68 - Jul 2012; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018; Refseq - NCBI Annotation Release 106
Alternative transcript names: ENST00000422842.1; RP11-257I14.1-001; OTTHUMT00000104671.1; NR_134503.1
Alternative gene names: ENSG00000234173.1; RP11-257I14.1; OTTHUMG00000045026.1; AL353784.1; LOC105378311


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 2.8818 non-coding 
CPAT coding probability 0.73% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-MTRNR2L5-4:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-MTRNR2L5-4:1
4.0 lnc-MTRNR2L5-4:1
4.1 lnc-MTRNR2L5-4:1
5.0 lnc-MTRNR2L5-4:1
5.1 lnc-MTRNR2L5-4:1
5.2 lnc-MTRNR2L5-4:1