Transcript: lnc-MTRR-16:2

Basic information

LNCipedia transcript ID: lnc-MTRR-16:2 
LNCipedia gene ID: lnc-MTRR-16
Location (hg38): chr5:8754869-8756884
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2016 bp
Exons: 1
Sources: NONCODE v4; Hangauer et al., 2013
Alternative transcript names: NONHSAT100311; FPKM1_group_24902_transcript_2
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -14.4754 non-coding 
CPAT coding probability 6.70% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-MTRR-16:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-MTRR-16:2
4.0 lnc-MTRR-16:2
4.1 lnc-MTRR-16:2
5.0 lnc-MTRR-16:2
5.1 lnc-CARD6-301:2
5.2 lnc-MTRR-16:2