Transcript: lnc-MUC20-67:53

Basic information

LNCipedia transcript ID: lnc-MUC20-67:53 
LNCipedia gene ID: lnc-MUC20-67
Location (hg38): chr3:195688739-195711689
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 513 bp
Exons: 5
Sources: Gencode v13; Ensembl release 68 - Jul 2012
Alternative transcript names: ENST00000420851.1; AC069513.3-013; OTTHUMT00000341946.1
Alternative gene names: ENSG00000242086.2; AC069513.3; OTTHUMG00000155834.2; ; ENST00000453324


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 101.2939 coding 
CPAT coding probability 35.63% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-MUC20-67:53 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AC069257.9.1-4:2
4.0 LINC00969:53
4.1 LINC00969:53
5.0 LINC00969:53
5.1 lnc-MUC20-13:53
5.2 lnc-MUC20-67:53