Transcript: lnc-MUC20-6:5

Basic information

LNCipedia transcript ID: lnc-MUC20-6:5 
LNCipedia gene ID: lnc-MUC20-6
Location (hg38): chr3:195635758-195636397
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 543 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00006375; NONHSAT094167
Alternative gene names: XLOC_002995; linc-MUC20-3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 31.5868 non-coding 
CPAT coding probability 3.54% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-MUC20-6:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-AC069257.9.1-4:1
3.1 lnc-AC069257.9.1-6:1
4.0 lnc-AC069257.9.1-6:1
4.1 lnc-AC069257.9.1-6:1
5.0 lnc-AC069257.9.1-6:1
5.1 lnc-MUC20-6:2
5.2 lnc-MUC20-6:5