Transcript: lnc-MUC22-1:10

Basic information

LNCipedia transcript ID: lnc-MUC22-1:10 
LNCipedia gene ID: lnc-MUC22-1
RefSeq ID: NR_003948
Location (hg38): chr6:31053450-31059890
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2183 bp
Exons: 4
Sources: Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_003948.2
Alternative gene names: HCG22


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -94.0619 non-coding 
CPAT coding probability 66.38% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-MUC22-1:10 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 lnc-TNF-38:3
5.1 lnc-TNF-38:3
5.2 lnc-MUC22-1:10