Transcript: lnc-MVB12B-1:1

Basic information

LNCipedia transcript ID: lnc-MVB12B-1:1 
LNCipedia gene ID: lnc-MVB12B-1
Ensembl Gene ID: ENSG00000233721
Ensembl Transcript ID: ENST00000454034
Location (hg38): chr9:126516417-126518808
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 719 bp
Exons: 2
Sources: Broad Institute; Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: TCONS_00015753; ENST00000454034; ENST00000454034.1; RP11-205K6.1-001; OTTHUMT00000054116.1; NONHSAT134769
Alternative gene names: XLOC_007567; linc-LMX1B-2; ENSG00000233721; RP11-205K6.1; ENSG00000233721.1; OTTHUMG00000020688.1; AL356309.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -76.3708 non-coding 
CPAT coding probability 8.91% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-MVB12B-1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-FAM125B-1:1
3.1 lnc-FAM125B-1:1
4.0 lnc-FAM125B-1:1
4.1 lnc-FAM125B-1:1
5.0 lnc-FAM125B-1:1
5.1 lnc-PTPA-136:1
5.2 lnc-MVB12B-1:1