Transcript: lnc-MVP-3:17

Basic information

LNCipedia transcript ID: lnc-MVP-3:17 
LNCipedia gene ID: lnc-MVP-3
Location (hg38): chr16:29863852-29865399
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 772 bp
Exons: 4
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000214725.3|FTMT26300025547.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 90.2553 coding 
CPAT coding probability 22.21% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-MVP-3:17 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 CDIPT-AS1:29
5.0 CDIPT-AS1:29
5.1 lnc-PRRT2-8:28
5.2 lnc-MVP-3:17