Transcript: lnc-MVP-3:2

Basic information

LNCipedia transcript ID: lnc-MVP-3:2 
LNCipedia gene ID: lnc-MVP-3
Location (hg38): chr16:29863551-29868050
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 620 bp
Exons: 5
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000214725.3|ENCT00000157965.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -102.1619 non-coding 
CPAT coding probability 4.66% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-MVP-3:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 CDIPT-AS1:20
5.0 CDIPT-AS1:20
5.1 lnc-PRRT2-8:13
5.2 lnc-MVP-3:2