Transcript: lnc-MVP-3:20

Basic information

LNCipedia transcript ID: lnc-MVP-3:20 
LNCipedia gene ID: lnc-MVP-3
Location (hg38): chr16:29863852-29868050
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1062 bp
Exons: 5
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000214725.3|ENCT00000157969.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 2.6891 non-coding 
CPAT coding probability 29.49% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-MVP-3:20 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 CDIPT-AS1:32
5.0 CDIPT-AS1:32
5.1 lnc-PRRT2-8:31
5.2 lnc-MVP-3:20