Transcript: lnc-MVP-3:9

Basic information

LNCipedia transcript ID: lnc-MVP-3:9 
LNCipedia gene ID: lnc-MVP-3
Location (hg38): chr16:29863674-29867994
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 589 bp
Exons: 6
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000214725.3|FTMT26300019222.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 90.2553 coding 
CPAT coding probability 21.11% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-MVP-3:9 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 CDIPT-AS1:25
5.0 CDIPT-AS1:25
5.1 lnc-PRRT2-8:20
5.2 lnc-MVP-3:9