Transcript: lnc-MYCN-132:4

Basic information

LNCipedia transcript ID: lnc-MYCN-132:4 
LNCipedia gene ID: lnc-MYCN-132
Ensembl Gene ID: ENSG00000228876
Ensembl Transcript ID: ENST00000644340
Location (hg38): chr2:16228332-16285624
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1232 bp
Exons: 4
Sources: Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000644340.1
Alternative gene names: ENSG00000228876.2; AC010745.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -92.674 non-coding 
CPAT coding probability 1.49% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-MYCN-132:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 lnc-SNX17-132:4
5.1 lnc-SNX17-132:4
5.2 lnc-MYCN-132:4