Transcript: lnc-MYH13-2:1

Basic information

LNCipedia transcript ID: lnc-MYH13-2:1 
LNCipedia gene ID: lnc-MYH13-2
Location (hg38): chr17:10159804-10164068
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 4265 bp
Exons: 1
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4
Alternative transcript names: ENST00000578276.1; CTB-104H12.5-001; OTTHUMT00000442087.1; NONHSAT145610
Alternative gene names: ENSG00000263807.1; CTB-104H12.5; OTTHUMG00000178463.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 8.7661 non-coding 
CPAT coding probability 0.72% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-MYH13-2:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-MYH13-2:1
4.0 lnc-MYH13-2:1
4.1 lnc-MYH13-2:1
5.0 lnc-MYH13-2:1
5.1 lnc-RCVRN-2:1
5.2 lnc-MYH13-2:1