Transcript: lnc-MYO1D-3:1

Basic information

LNCipedia transcript ID: lnc-MYO1D-3:1 
LNCipedia gene ID: lnc-MYO1D-3
Ensembl Gene ID: ENSG00000265544
Ensembl Transcript ID: ENST00000579745
Location (hg38): chr17:33529787-33533760
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 632 bp
Exons: 3
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000579745.1; RP11-31I22.1-001; OTTHUMT00000447557.1; NONHSAT052982; NR_037584
Alternative gene names: ENSG00000265544.1; RP11-31I22.1; OTTHUMG00000179663.1; AA06; AC011824.3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -189.7206 non-coding 
CPAT coding probability 2.30% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-MYO1D-3:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-MYO1D-3:1
4.0 lnc-MYO1D-3:1
4.1 lnc-MYO1D-3:1
5.0 lnc-MYO1D-3:1
5.1 lnc-SLC6A4-138:1
5.2 lnc-MYO1D-3:1