Transcript: lnc-MYO6-16:1

Basic information

LNCipedia transcript ID: lnc-MYO6-16:1 
LNCipedia gene ID: lnc-MYO6-16
Ensembl Gene ID: ENSG00000280511
Ensembl Transcript ID: ENST00000626131
Location (hg38): chr6:76561328-76562590
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 627 bp
Exons: 2
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000626131.1
Alternative gene names: ENSG00000280511.1; RP11-35J1.2; AL591030.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 3.6019 non-coding 
CPAT coding probability 0.63% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-MYO6-16:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-MYO6-16:1
4.1 lnc-MYO6-16:1
5.0 lnc-MYO6-16:1
5.1 lnc-CYB5R4-62:1
5.2 lnc-MYO6-16:1