Transcript: lnc-MYOM1-3:1

Basic information

LNCipedia transcript ID: lnc-MYOM1-3:1 
LNCipedia gene ID: lnc-MYOM1-3
Ensembl Gene ID: ENSG00000266513
Ensembl Transcript ID: ENST00000584060
Location (hg38): chr18:3770017-3771430
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 557 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000584060.1; RP11-874J12.3-001; OTTHUMT00000441579.1; NONHSAT057014
Alternative gene names: ENSG00000266513.1; RP11-874J12.3; OTTHUMG00000178332.1; AP002478.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -361.0131 non-coding 
CPAT coding probability 0.09% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-MYOM1-3:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-MYOM1-3:1
4.0 lnc-MYOM1-3:1
4.1 lnc-MYOM1-3:1
5.0 lnc-MYOM1-3:1
5.1 lnc-SMAD2-350:1
5.2 lnc-MYOM1-3:1