Transcript: lnc-N4BP2L2-2:12

Basic information

LNCipedia transcript ID: lnc-N4BP2L2-2:12 
LNCipedia gene ID: lnc-N4BP2L2-2
Ensembl Gene ID: ENSG00000270008
Ensembl Transcript ID: ENST00000461502
Location (hg38): chr13:32425358-32432954
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 764 bp
Exons: 2
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT033097; ENST00000461502.1
Alternative gene names: ENSG00000270008.1; RP11-298P3.4; AL137247.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -75.5604 non-coding 
CPAT coding probability 12.72% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-N4BP2L2-2:12 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RP11-298P3.4.1-2:9
4.0 lnc-RP11-298P3.4.1-2:9
4.1 lnc-RP11-298P3.4.1-2:9
5.0 lnc-RP11-298P3.4.1-2:9
5.1 lnc-UBL3-23:9
5.2 lnc-N4BP2L2-2:12