Transcript: lnc-NACA2-10:1

Basic information

LNCipedia transcript ID: lnc-NACA2-10:1 
LNCipedia gene ID: lnc-NACA2-10
Location (hg38): chr17:61399897-61409140
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 3842 bp
Exons: 2
Sources: Biogazelle lncRNA chip
Alternative transcript names: ENST00000502172
Alternative gene names: ENSG00000245950;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 485.5515 coding 
CPAT coding probability 79.92% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-NACA2-10:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-NACA2-1:1
3.1 lnc-NACA2-1:1
4.0 TBX2-AS1:2
4.1 TBX2-AS1:2
5.0 TBX2-AS1:2
5.1 lnc-TUBD1-19:1
5.2 lnc-NACA2-10:1