Transcript: lnc-NACA2-6:1

Basic information

LNCipedia transcript ID: lnc-NACA2-6:1 
LNCipedia gene ID: lnc-NACA2-6
Ensembl Gene ID: ENSG00000267667
Ensembl Transcript ID: ENST00000585921
Location (hg38): chr17:61130704-61135964
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 286 bp
Exons: 2
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT055113; ENST00000585921.1
Alternative gene names: ENSG00000267667.1; RP11-136H19.1; AC005856.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 2.0236 non-coding 
CPAT coding probability 1.29% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-NACA2-6:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-NACA2-6:1
4.0 lnc-NACA2-6:1
4.1 lnc-NACA2-6:1
5.0 lnc-NACA2-6:1
5.1 lnc-TUBD1-17:1
5.2 lnc-NACA2-6:1