Transcript: lnc-NADSYN1-1:1

Basic information

LNCipedia transcript ID: lnc-NADSYN1-1:1 
LNCipedia gene ID: lnc-NADSYN1-1
Location (hg38): chr11:71448540-71452136
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 793 bp
Exons: 2
Sources: Broad Institute
Alternative transcript names: TCONS_00019374
Alternative gene names: XLOC_009199; linc-NADSYN1-1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -1.7792 non-coding 
CPAT coding probability 1.66% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-NADSYN1-1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-NADSYN1-1:1
3.1 lnc-NADSYN1-1:1
4.0 lnc-NADSYN1-1:1
4.1 lnc-NADSYN1-1:1
5.0 lnc-NADSYN1-1:1
5.1 lnc-TCIRG1-60:1
5.2 lnc-NADSYN1-1:1