Transcript: lnc-NARF-1:1

Basic information

LNCipedia transcript ID: lnc-NARF-1:1 
LNCipedia gene ID: lnc-NARF-1
Ensembl Gene ID: ENSG00000262652
Ensembl Transcript ID: ENST00000570869
Location (hg38): chr17:82578023-82578616
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 594 bp
Exons: 1
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000570869.1; RP13-638C3.2-001; OTTHUMT00000439992.1; NONHSAT056725
Alternative gene names: ENSG00000262652.1; RP13-638C3.2; OTTHUMG00000177961.1; AC124283.3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score non-coding 
CPAT coding probability 0.01% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-NARF-1:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-NARF-1:1
4.0 lnc-NARF-1:1
4.1 lnc-NARF-1:1
5.0 lnc-NARF-1:1
5.1 lnc-TSPAN10-71:1
5.2 lnc-NARF-1:1