Transcript: lnc-NAT1-3:14

Basic information

LNCipedia transcript ID: lnc-NAT1-3:14 
LNCipedia gene ID: lnc-NAT1-3
RefSeq ID: NR_125429
Location (hg38): chr8:18084868-18097651
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2309 bp
Exons: 5
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_125429; NR_125429.1
Alternative gene names: LOC101929066


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 18.7511 non-coding 
CPAT coding probability 1.29% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-NAT1-3:14 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PCM1-3:13
4.0 lnc-PCM1-3:13
4.1 lnc-NAT1-3:14
5.0 lnc-NAT1-3:14
5.1 lnc-PCM1-3:26
5.2 lnc-NAT1-3:14