Transcript: lnc-NAT1-3:24

Basic information

LNCipedia transcript ID: lnc-NAT1-3:24 
LNCipedia gene ID: lnc-NAT1-3
Location (hg38): chr8:18094671-18097638
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2514 bp
Exons: 2
Sources: NONCODE v4; Hangauer et al., 2013
Alternative transcript names: NONHSAT125333; FPKM1_group_30948_transcript_1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 18.7511 non-coding 
CPAT coding probability 0.76% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-NAT1-3:24 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PCM1-3:11
4.0 lnc-PCM1-3:11
4.1 lnc-NAT1-3:24
5.0 lnc-NAT1-3:24
5.1 lnc-PCM1-3:36
5.2 lnc-NAT1-3:24