Transcript: lnc-NBN-1:33

Basic information

LNCipedia transcript ID: lnc-NBN-1:33 
LNCipedia gene ID: lnc-NBN-1
Location (hg38): chr8:89587300-89725890
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1899 bp
Exons: 7
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000251136.4|FTMT22900013639.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 0.9257 non-coding 
CPAT coding probability 0.69% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-NBN-1:33 no no no no

Available literature

  1. Wu (2015), Association of large intergenic noncoding RNA expression with disease activity and organ damage in systemic lupus erythematosus., Arthritis Res. Ther.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-NBN-1:33
5.0 lnc-NBN-1:33
5.1 lnc-ZNF706-219:23
5.2 lnc-NBN-1:33